Comprehensive Transcriptome Sequencing Analysis of Hirudinaria manillensis in Different Growth Periods
Basic science published in Front Physiol (2022)
Abstract
Medical leeches are widely been used in biochemical and clinical medical studies, helping to restore blood circulation to grafted or severely injured tissue. Mostly, adult leeches are being used in the traditional pharmacopeia, but the gene expression profiling of leeches in different growth periods is not well-reported. So, in this study, we used transcriptome analysis to analyze the comparative gene expression patterns of Hirudinaria manillensis (H. manillensis) in different growth periods, including larval, young, and adult stages. We constructed 24 cDNA libraries from H. manillensis larval, young, and adult stages, and about 54,639,118 sequences were generated, 18,106 mRNA transcripts of which 958 novel mRNAs and 491 lncRNAs were also assembled as well. Furthermore, the results of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses revealed that the differentially upregulated genes from the larval to adult stages were enriched in pathways such as cilium, myofibril, contractile fiber, cytoskeleton proteins, dilated cardiomyopathy, adrenergic signaling in cardiomyocytes, etc. Moreover, in the adult stages, a significant increase in the expression of the Hirudin-HM (HIRM2) genes was detected. In addition, our comparative transcriptome profiling data from different growth stages of H. manillensis also identified a large number of DEGs and DElncRNAs which were tentatively found to be associated with the growth of H. manillensis; as it grew, the muscle-related gene expression increased, while the lipid metabolism and need for stimulation and nutrition-related genes decreased. Similarly, the higher expression of HIRM2 might attribute to the high expression of protein disulfide isomerase gene family (PDI) family genes in adulthood, which provides an important clue that why adult leeches rather than young leeches are widely used in clinical therapeutics and traditional Chinese medicine.
Abstract sourced from PubMed (NCBI) for the cited record. See the original publication for the authoritative version.
Zusammenfassung
RNA-Seq of Hirudinaria manillensis larval, young, and adult leeches reveals hirudin-HM upregulation in adult stage explaining clinical preference for mature leeches.
Warum dies für die Hirudotherapie relevant ist
Diese Studie führte eine vergleichende Transkriptom-Sequenzierung (24 cDNA-Bibliotheken) von Hirudinaria manillensis über Larven-, Jungtier- und Adultstadien hinweg durch, assemblierte ~18.106 mRNA-Transkripte und identifizierte differenziell exprimierte Gene, die in Muskel-/Kontraktilitäts- und Signalwegen angereichert waren, mit signifikant höherer Expression von Hirudin-HM (HIRM2) und Genen der Proteindisulfidisomerase-Familie im Adultstadium, was möglicherweise erklärt, warum adulte Blutegel für die klinische Anwendung bevorzugt werden. Für ASH ist dies relevant, da es die entwicklungsbezogene Genexpression – insbesondere hirudinbezogener antikoagulatorischer Transkripte – mit dem in der Hirudotherapie und der traditionellen Medizin verwendeten Lebensstadium verknüpft. Die Einschränkung besteht darin, dass es sich um eine deskriptive transkriptomische Studie ohne funktionelle Validierung der DEGs in vivo, ohne Sekretom-Proteinmessung und ohne klinische Daten handelt, sodass die abgeleitete Begründung für die Bevorzugung adulter Tiere eine Korrelation bleibt.
Zitation
Comprehensive Transcriptome Sequencing Analysis of Hirudinaria manillensis in Different Growth Periods.
Shan H et al. · Frontiers in physiology, 2022
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